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BI132 - Environmental Science 2

Help with finding material on northwest salmon

Physiology

Arkoosh, M. R., Van Gaest, A. L., Strickland, S. A., Hutchinson, G. P., Krupkin, A. B., & Dietrich, J. P. 
      (2017). Alteration of thyroid hormone concentrations in juvenile Chinook salmon (Oncorhynchus 
      tshawytscha) exposed to polybrominated diphenyl ethers, BDE-47 and BDE-99. Chemosphere, 
      171, 1-8. 10.1016/j.chemosphere.2016.12.035
Beamish, R., Wade, J., Pennell, W., Gordon, E., Jones, S., Neville, C., 
      … Sweeting, R. (2009). A large, natural infection of sea lice 
      on juvenile Pacific salmon in the Gulf Islands area of British 
      Columbia, Canada. Aquaculture, 31-37. 
      doi:10.1016/j.aquaculture.2009.09.001
Beamish, R.J., Neville, C.M., Sweeting, R.M., & Ambers, N. (2005). Sea 
      lice on adult Pacific salmon in the coastal waters of Central 
      British Columbia, Canada. Fisheries Research, 76, 198-208. 
      doi:10.1016/j.fishres.2005.06.007
Breyta, R., Black, A., Kaufman, J., & Kurath, G. (2016). Spatial and temporal heterogeneity 
      of infectious hematopoietic necrosis virus in Pacific Northwest salmonids. Infection, Genetics 
      and Evolution, 45, 347-358. doi: 10.1016/j.meegid.2016.09.022
Casselman, M.T., Anttila, K., & Farrell, A.P. (2012). Using 
      maximum heart rate as a rapid screening tool to determine optimum 
      temperature for aerobic scope in Pacific salmon Oncorhynchus spp.
      Journal of Fish Biology, 80, 358–377. 
      doi:10.1111/j.1095-8649.2011.03182.x
Clark, T.D. (2006, June). Physiological benefits of being small in a 
      changing world: Responses of coho salmon (Oncorhynchus kisutch) to 
      an acute thermal challenge and a simulated capture event. PloS one, 
      7, e39079. DOI:10.1371/journal.pone.0039079
Cogliati, K. M., Unrein, J. R., Stewart, H. A., Schreck, C. B., & Noakes, 
      D. L. (2018). Egg size and emergence timing affect morphology and behavior 
      in juvenile Chinook Salmon, Oncorhynchus tshawytscha. Ecology and 
      evolution, 8(1), 778-789. doi:10.1002/ece3.3670
Dolan, B. P., Fisher, K. M., Colvin, M. E., Benda, S. E., Peterson, J. T., Kent, 
      M. L., & Schreck, C. B. (2016). Innate and adaptive immune responses in migrating 
      spring-run adult chinook salmon, Oncorhynchus tshawytscha. Fish & Shellfish 
      Immunology, 48, 136-144. doi: 10.1016/j.fsi.2015.11.015
Donaldson, M.R., Hinch, S.G., Jeffries, K.M., Patterson, D.A., Cooke, S.J., Farrell, 
      A.P., & Miller, K.M. (2014). Species- and sex-specific responses and recovery of wild, 
      mature pacific salmon to an exhaustive exercise and air exposure stressor. Comparative 
      Biochemistry and Physiology, Part A, 173, 7-16.  doi:
      10.1016/j.cbpa.2014.02.019
Farrell, A.P. & Clark, T.D. (2011). Effects of body mass on physiological
      and anatomical parameters of mature salmon: evidence against a 
      universal heart rate scaling exponent. Journal of Experimental 
      Biology 214, 887-893. doi: 10.1242/?jeb.051607
Ferguson,  J.A., Romer, J. Sifneos, J.C., Madsen, L., Schreck, C.B., Glynne, 
      M., Kent, M.L. (2012). A systematic surveillance programme for infectious salmon anaemia 
      virus supports its absence in the Pacific Northwest of the United States. Journal of fish diseases, 
      41(2), 337-346. doi:10.1111/jfd.12733
Hallett, S. L., Ray, R. A., Hurst, C. N., Holt, R. A., Buckles, G. R., Atkinson, S. D., & 
      Bartholomew, J. L. (2012). Density of the waterborne parasite Ceratomyxa shasta and its 
      biological effects on salmon. Applied and Environmental Microbiology, 78, 3724-3731. 
      doi: 10.1128/AEM.07801-11
Hurst, C., Alexander, J., Dolan, B., Jia, L., & Bartholomew, J. (2019). 
      Outcome of within-host competition demonstrates that parasite virulence 
      doesn't equal success in a myxozoan model system. International Journal 
      for Parasitology: Parasites and Wildlife, 9, 25-35. 
      doi: 10.1016/j.ijppaw.2019.03.008
Katzman, S. & Cech , J.J. (2001). Juvenile coho salmon locomotion and mosaic 
      muscle are modified by 3',3',5'-tri-iodo-l-thyronine (T(3)). Journal of 
      Experimental Biology, 204: 1711 - 1717.  Retrieved January 14, 2004, from 
      http://jeb.biologists.org/cgi/content/abstract/204/10/1711
Keefer, M., Clabough, T., Jepson, M., Bowerman, T., & Caudill, C. (2019). 
      Temperature and depth profiles of Chinook salmon and the energetic costs 
      of their long-distance homing migrations. Journal of Thermal Biology, 79, 
      155-165. doi:10.1016/j.jtherbio.2018.12.011
Leggatt, R. A., Sundström, L. F., Woodward, K., & Devlin, R. H. (2017). 
      Growth-enhanced transgenic coho salmon (Oncorhynchus kisutch) strains 
      have varied success in simulated streams: implications for risk assessment. 
      PloS one, 12(1), e0169991. doi: 10.1371 /journal.pone.0169991
Lundmark, C. (2001, October).  Salmon life stories recorded naturally. Bioscience
      51, 1/2p.  Retrieved january 26, 2010, from Academic OneFile
Macfarlane, B. &  Norton, E.C. (2002, April).  Physiological ecology of 
      juvenile chinook salmon (Oncorhynchus tshawytscha) at the southern end of 
      their distribution, the San Francisco Estuary and the Gulf of the Farallones, 
      California. Fishery Bulletin 100, 244-257. Retrieved June 14, 2002 from 
      https://spo.nmfs.noaa.gov/content/physiological-ecology-juvenile-chinook
      -salmon-oncorhynchus-tshawytscha-southern-end-their
McCovey, B.W. (2008). Lower Klamath River adult chinook salmon pathology
      monitoring, 2007. Hoopa, CA: Klamath River Division Yurok Tribal 
      Fisheries Program. Retrieved January 30, 2013, from 
      http://yuroktribe.nsn.us/departments/fisheries/documents
      /2007adultsalmonpathologytechmemoFINAL_001.pdf
Madison, B.N., Heath, J.W., Heath, D.D., & Bernier, N.J. (2013). Effect of parental 
      mate choice and semi-natural early rearing environment on the growth performance 
      and seawater tolerance of Chinook salmon Oncorhynchus tshawytscha. Journal of 
      Fish Biology, 18, 618-636. doi:10.1111/jfb.12018
Meador, J.P., Sommers, F.C., Ylitalo, G.M., Sloan, C.A.  (2006). Altered growth 
      and related physiological responses in juvenile Chinook salmon (Oncorhynchus 
      tshawytscha) from dietary exposure to polycyclic aromatic hydrocarbons (PAHs).
       Canadian Journal of Fisheries & Aquatic Sciences, 63, 2364-2376. 
       doi:10.1139/F06-127
Miller, K.M, Teffer, A., Tucker, S., Li, S., Schulze, A.D Trudel, M., ... Hinch, S.G. (2014). 
      Infectious disease, shifting climates, and opportunistic predators: cumulative factors 
      potentially impacting wild salmon declines. Evolutionary Applications 7, 812-855. 
      doi: 10.1111/eva.12164
Milston, R.H., et al. (2003). Short-term exposure of chinook salmon (Oncoryhnchus 
      tshawytscha) to o,p'-DDE or DMSO during early life-history stages causes long-
      term humoral immunosuppression. Environmental Health Perspectives, 111, 
      1601-1607. Retrieved January 27, 2010, from Academic OneFile
Mordecai, G., Miller, K., Schulze, A., Kaukinen, K., Ming, T., Li, S., . . . 
      Suttle, C. (2019). Endangered wild salmon infected by newly discovered 
      viruses. ELife, 8, e47615. doi: 10.7554/eLife.47615
Oxman, D.S., Barnett-Johnson, R., Smith, M.E., Coffin, A., Miller,
      D.L., Josephson, R., & Popper, A.N. (2007, November). The effect of vaterite 
      deposition on sound reception, otolith morphology, and inner ear sensory epithelia 
      in hatchery-reared Chinook salmon (Oncorhynchus tshawytscha).  Canadian 
      Journal of Fisheries and Aquatic Sciences, 64(11), 1469-1478. DOI:10.1139/F07-106
      Also available at http://www.barnett-johnson.com/uploads/1/9/9/0/1990941/
      oxman_et_al_cjfas.pdf
Pagowski, V., Mordecai, G., Miller, K., Schulze, A., Kaukinen, K., Ming, T., . . . 
      Suttle, C. (2019, April). Distribution and phylogeny of erythrocytic necrosis 
      virus (ENV) in salmon suggests marine origin. Viruses, 11(4), 358
      doi: 10.3390/v11040358
Pecquerie, L., Johnsion, L.R., Kooijman, S.A.L.M., & Nisbet, R.M. (2011). 
      Analyzing variations in life-history traits of Pacific salmon in the 
      context of Dynamic Energy Budget (DEB) theory. Journal of Sea Research,
       66, 424–433. doi:10.1016/j.seares.2011.07.005
Sensor fish provides insight into salmon's journey. (2001, January). Civil 
      Engineering 71, 2/3 p.
      
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      and cannot use the paper version of this journal, contact the librarian at 
      503-399-5231 or reference@chemeketa.edu to obtain a copy of the article.
Tanaka, H., Takagi, Y. & Naito, Y. (2001, November).  Swimming speeds and buoyancy
      compensation of adult chum salmon Oncorhynchus keta revealed by speed/depth/
      acceleration logger. Journal of Experimental Biology 204, 3895-3904.
      Retrieved October 21, 2002, from 
      http://jeb.biologists.org/cgi/content/full/204/22/3895.
Wiens, G.D., Pascho, R. & Winton, J.R. (2002). A  Single Ala139-to-Glu 
      Substitution in the Renibacterium salmoninarum Virulence-Associated Protein p57 
      Results in Antigenic Variation and Is Associated with Enhanced p57 Binding to 
      Chinook Salmon Leukocytes . Applied and Environmental Microbiology 68, 
      3969-3977. Retrieved January 14, 2004, from 
      http://aem.asm.org/cgi/content/abstract/68/8/3969